Figure 3

Pathway module activation scores across intrinsic subtypes in ER+ breast cancer. A-H) For the selected module in each pathway, we show boxplots of predicted pathway module activation scores across the major intrinsic subtypes within ER+ breast cancer as estimated in Set1. I-P) Corresponding boxplots as estimated in Set2. Number of samples in each subtype shown above corresponding boxplot. (Color Code: green = normal, skyblue = lumA, blue = lumB, pink = HER2+).