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Table 2 Oligonucleotide specifications.

From: SHOX2 DNA Methylation is a Biomarker for the diagnosis of lung cancer based on bronchial aspirates

Concentration [μM]

 

Total Quantification Assay

Methylation Quantification Assay

Sequence (5' → 3')

0.3

0.5

GTTTTTTGGATAGTTAGGTAAT

0.15

0.15

CCTCCTACCTTCTAACCC

0.15

NA

6-FAM-CCGGGGTTGTATGAGTATAGGCCCCGG-BHQ1-C18-CCTCCTACCTTCTAACCC

NA

0.15

6-FAM-CCGGGGTTGTATGAGTATAGGCCCCGG-BHQ1-C18-CCTCCTACCTTCTAACCC

NA

1

TAATTTTTGTTTTGTTTGTTTGATTGGGGTTGTATGA-SpacerC3

NA

1

ACCCAACTTAAACAACAAACCCTTTA-SpacerC3

  1. All oligonucleotides were supplied from biomers.net GmbH, Ulm, Germany.