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Table 2 Sequence of oligonucleotide primers used for PCR amplification and product size predicted for sample cDNA.

From: Defensin alpha 6 (DEFA 6) overexpression threshold of over 60 fold can distinguish between adenoma and fully blown colon carcinoma in individual patients

Gene name

Gene annotation

RefSeq ID

Sequence

Amplicon size

DEFA 1-3*

Defensin, alpha 1 to 3

NM_005218.3

CCTGCCTAGCTAGAGGATCTGTG

222 bp

  

NM_005217.2

TGTTTTTCCTTGAGCCTGGA

 

DEFA 6*

Defensin, alpha 6, Paneth cell-specific

NM_001926.2

CTCAAGTCTTAGAGCTTTGGGCT

198 bp

   

GGACACACGACAGTTTCCTTC

 

β-actin*

Beta actin

NM_001101

AGAGCCTCGCCTTTGCCGAT

160 bp

   

CCCACGATGGAGGGGAAGAC

 
  1. * All primers are listed as 5' to 3'.