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Table 1 Primers used in the study

From: Alternative splicing and nonsense-mediated decay regulate telomerase reverse transcriptase (TERT) expression during virus-induced lymphomagenesis in vivo

Oligonucleotide1

Localization2

Sequence3

Screening

tert e3-M331s

e3 (2210-39)

CTGTTCCTGCCTATGAACATTGTTACCGTG

chTERT cDNA

tert e3M137-s

e3 (2260-80)

CTATACTGGCTGATGGATTCC

exon 4

M139s

e4 (2480-500)

CATCAAGGCTCCGGTTCATTC

exon 5

M141s

e5 (2680-700)

GGGAGAGATGATATCTACAGG

exon 6

M142r

e5 (2700-680)

CCTGTAGATATCATCTCTCCC

exon 4

M143s

e6 (2815-35)

GTGGAAGTGATATCACAGGTC

exon 7

M144r

e6 (2835-15)

GACCTGTGATATCACTTCCAC

exon 5

M145s

e7 (2974-92)

GTGTCCAAGCTTCAAGAGA

exon 8

M146r

e7 (2992-74)

TCTCTTGAAGCTTGGACAC

exon 6

M147s

e8 (3040-60)

AATGAGAACAGTTCCACCCTG

exon 9

M148r

e8 (3060-40)

CAGGGTGGAACTGTTCTCATT

exon 7

M149s

e9 (3172-92)

AGCTTATGCTACGGAGACATG

exon 10

M150r

e9 (3192-72)

CATGTCTCCGTAGCATAAGCT

exon 8

M151s

e10 (3258-79)

GCTGGTTACGCCACATTTAATG

exon 11

M152r

e10 (3279-58)

CATTAAATGTGGCGTAACCAGC

exon 9

M153s

e11 (3373-93)

GATGATATCCCGGGATGTTCC

exon 12

M154r

e11 (3393-73)

GGAACATCCCGGGATATCATC

exon 10

M155s

e12 (3556-76)

TGCAAATTGACTGCAGTCCTC

exon 13

rM156r

e12 (3576-56)

GAGGACTGCAGTCAATTTGCA

exon 11

M157s

e13 (3618-42)

CAGCCTTCAGACAGTTCTAATTAAC

exon 14

M158r

e13 (3642-18)

GTTAATTAGAACTGTCTGAAGGCT

exon 12

M159s

e14 (3727-47)

CCTGATTTCTTCCTAAGGATC

exon 15

M160r

e14 (3747-27)

GATCCTTAGGAAGAAATCAGG

exon 13

M162r

e15 (3870-50)

ATGGTAGCACAGCCATTCTGC

exon 14

M163r

e16 (3996-76)

CACCGTCTTCAGCAGTTCCAT

exon 15

tert e16-M316-r

e16 (4041-07)

TTAGTCCAGTATAGTTTTGAAATCTTGACAAAGCG

chTERT cDNA

TET-tert e4

e4 (2554-78)

TET-CAGAAACTCAGCAAGGAAAGCAGAG

splice variant 5

tert e6

e6 (2874-55)

CCACCTTATTCCATAGACAG

splice variant 5

TET-tert e9

e9 (3170-92)

TET-GCAGCTTATGCTACGGAGACATG

splice variant 10

tert e11

e11 (3361-42)

TCACCACAGTCTTCTTGGCA

splice variant 10

  1. 1 name of the primer with TET labeling indication,
  2. 2 localization in the chTERT cDNA sequence AY626231 (NCBI n°)
  3. 3 written in the 5'->3' orientation