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Table 6 Genes in early stage binary p53 signature.

From: Expression signatures of TP53 mutations in serous ovarian cancers

Gene

Probe ID

p-value

Fold change*

Prior evidence for p53 association

Intersect with genes from Table 4

DDB2

203409_at

7.89E-05

1.56

Yes

Yes

SLBP

206052_s_at

1.05E-04

0.44

  

TTC38

218272_at

1.41E-04

1.33

  

TRADD

205641_s_at

1.87E-04

1.33

  

FLJ21865

220349_s_at

1.93E-04

1.39

  

LTB4R

216388_s_at

2.18E-04

1.28

  

CYB561

207986_x_at

2.42E-04

1.26

  

GOLT1B

218193_s_at

2.53E-04

0.62

  

SQSTM1

220341_s_at

2.56E-04

1.37

  

PAPD4

222282_at

2.68E-04

1.41

  

RHEB

201453_x_at

3.11E-04

0.52

  

PACS1

220557_s_at

3.60E-04

1.35

  

TRIP13

204033_at

3.72E-04

0.59

Yes

 

P2RY5

218589_at

3.76E-04

1.88

  

SYNCRIP

209024_s_at

3.95E-04

0.64

  

ACTR2

200728_at

4.33E-04

0.60

Yes

 

PLEKHM1

212717_at

4.88E-04

1.37

 

Yes

TJP3

35148_at

4.88E-04

1.71

 

Yes

RAB22A

218360_at

5.07E-04

0.68

  

PARN

203905_at

5.51E-04

0.71

  

DFNB31

221887_s_at

5.59E-04

1.29

  

CHCHD8

220647_s_at

6.41E-04

0.70

  

EGFL8

208469_s_at

6.52E-04

1.34

  

ZRSR2

208174_x_at

7.50E-04

1.38

  

DRG2

203268_s_at

7.51E-04

1.27

  

ICMT

201611_s_at

8.01E-04

0.69

  

SMA4

206565_x_at

8.06E-04

1.59

  

GPC6

215387_x_at

8.60E-04

1.62

  

CRAT

209522_s_at

8.84E-04

1.43

  

PRC1

218009_s_at

8.86E-04

0.47

Yes

 

CSE1L

210766_s_at

9.46E-04

0.58

  

17p12 EST

216751_at

9.58E-04

1.46

  

MZF1

40569_at

9.64E-04

1.49

  

FANCI

213007_at

9.68E-04

0.60

  

ABCA7

219577_s_at

9.78E-04

1.36

  

SAFB

201748_s_at

9.79E-04

1.25

Yes

 

PFDN2

218336_at

9.87E-04

0.71

  

CDC2

203213_at

9.96E-04

0.54

Yes

 

FAM60A

220147_s_at

0.001024

0.62

  

STK38L

212572_at

0.001033

0.58

  

SF4

209547_s_at

0.001101

1.29

  

CSNK1A1

206562_s_at

0.001107

1.54

 

Yes

  1. * Mean fold change is relative to mutant p53 containing tumors
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