Table 1 List of the first 25 genes up- and down-regulated in tumours.
Gene name | Gene Description [Accession number] | FC |
|---|---|---|
Up-regulated | Â | Â |
Defcr4 | Defensin related cryptdin 4 [NM_001013053] | 183.2 |
Slc30a2 | Solute carrier family 30 (zinc transporter), member 2 [NM_012890] | 71.7 |
Lum | Lumican [NM_031050] | 70.0 |
Mmp12 | Matrix metallopeptidase 12 [NM_053963] | 65.1 |
Iggc | Immunoglobulin gamma2a constant region [DQ402472] | 58.8 |
Hoxd13_predicted | Homeo box D13 (predicted) [XM_221511] | 50.5 |
Igfbp5 | Insulin-like growth factor binding protein 5 [BC087030] | 48.4 |
CB548350 | Tenascin C [CB548350] | 47.0 |
Msr2_predicted | Macrophage scavenger receptor 2 (predicted) [XM_227485] | 45.7 |
Mx2 | Myxovirus (influenza virus) resistance 2 [NM_134350] | 43.9 |
Aldh1a3 | Aldehyde dehydrogenase family 1, subfamily A3 [NM_153300] | 42.8 |
Cxcl2 | Chemokine (C-X-C motif) ligand 2 [NM_053647] | 39.9 |
Mmp7 | Matrix metallopeptidase 7 [NM_012864] | 39.4 |
Nos2 | Nitric oxide synthase 2, inducible [NM_012611] | 38.1 |
S100a8 | S100 calcium binding protein A8 (calgranulin A) [NM_053822] | 36.2 |
Igfbp7 | Insulin-like growth factor binding protein 7 [XM_214014] | 35.8 |
Col12a1 | PREDICTED: procollagen, type XII, alpha 1 [XM_243912] | 35.7 |
Plod2 | Procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 [NM_175869] | 33.4 |
S100a9 | S100 calcium binding protein A9 (calgranulin B) [NM_053587] | 31.9 |
Ctgf | Connective tissue growth factor [NM_022266] | 31.5 |
Fn1 | Fibronectin 1 [NM_019143] | 31.4 |
T_predicted | T, brachyury homolog (mouse) (predicted) [XM_217890] | 30.0 |
Sparc | Secreted acidic cysteine rich glycoprotein [NM_012656] | 29.6 |
Cyp26b1 | Cytochrome P450, family 26, subfamily b, polypeptide 1 [NM_181087] | 29.4 |
Nkd1_predicted | Naked cuticle 1 homolog (Drosophila) (predicted) [XM_001066780] | 29.1 |
Down-regulated | Â | Â |
Slc26a3 | Solute carrier family 26, member 3 [NM_053755] | -502.6 |
Mptx | Mucosal pentraxin [NM_001037642] | -376.5 |
Retnla | Resistin like alpha [NM_053333] | -166.9 |
Zg16 | Zymogen granule protein 16 [NM_134409] | -105.3 |
Clca3_predicted | Chloride channel calcium activated 3 (predicted) [XM_217689] | -99.1 |
Grap | GRB2-related adaptor protein [NM_001025749] | -95.2 |
Fabp1 | Fatty acid binding protein 1, liver [NM_012556] | -94.7 |
Ceacam20_predicted | CEA-related cell adhesion molecule 20 (predicted) [XM_218430] | -92.8 |
Dpep1 | Dipeptidase 1 (renal) [NM_053591] | -90.9 |
Pbp2 | Phosphatidylethanlomine binding protein 2 [XM_575702] | -90.4 |
B4 galt2_predicted | UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 2 (predicted) [XM_242992] | -90.0 |
Apoa1 | Apolipoprotein A-I [NM_012738] | -80.6 |
Olr1611_predicted | Olfactory receptor 1611 (predicted) [XM_223954] | -80.5 |
Dmbt1 | PREDICTED: deleted in malignant brain tumours 1 (Dmbt1), [XM_577842] | -80.0 |
Muc2 | Mucin 2 [U07615] | -78.7 |
Trpm5_predicted | Transient receptor potential cation channel, subfamily M, member 5 (predicted) [XM_344979] | -73.1 |
Chia | Rattus norvegicus chitinase, acidic [NM_207586] | -72.7 |
Kb15 | Type II keratin Kb15 [XM_345877] | -72.6 |
Gpr156 | G protein-coupled receptor 156 [NM_153295] | -71.8 |
Pdha2 | Pyruvate dehydrogenase E1 alpha 2 [NM_053994] | -71.3 |
Hspa1l_mapped | Heat shock 70 kD protein 1-like (mapped) [NM_212546] | -71.0 |
Pcdhb13 | PREDICTED: Protocadherin beta 13 [XM_001055698] | -71.0 |
Pcsk4 | Proprotein convertase subtilisin/kexin type 4 [NM_133559] | -70.4 |
Masp1 | Mannan-binding lectin serine peptidase 1 [NM_022257] | -70.4 |
C1ql1_predicted | Complement component 1, q subcomponent-like 1 (predicted) [XM_343971] | -70.3 |