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From: Changes in neuronal activation patterns in response to androgen deprivation therapy: a pilot study

  Inputs EVs in model Output/contrasts
STEP 1: ENCODE data n.a. ENCODE* data
ICA data review (Separate for each paradigm and subject) RECOG data   RECOG* data
  MATCH data   MATCH* data
STEP 2: ENCODE* data EV1: route (or 3D) C11 = EV1-EV2
Subject paradigm analysis (Separate for each paradigm and subject) RECOG* data EV2: survey (or 2D) C12 = EV2-EV1
  MATCH* data EV3: fixation C13 = (EV1+EV2)-2*EV3
   EV4-9: motion parameters of no interest C14 = 2*EV3-(EV1+EV2)
STEP 3: C13 from each paradigm EV1: time1 > time2 C21 = EV1
Intra-subject analysis (Separate for each subject)   EV2-4: paired t-test parameters of no interest C22 = -EV1
STEP 4: C21 from each subject EV1: ADT C31 = EV1
Group time1 vs. time2 analysis   EV2: CTR C32 = -EV1
    C33 = EV2
    C34 = -EV2
    C35 = EV1-EV2
    C36 = EV2-EV1
STEP 5: C11 or C13 from each subject EV1: ADTtime1 > ADTtime2 C41 = EV1
Group paradigm analysis (Separate for each paradigm)   EV2: CTRtime1 > CTRtime2 C42 = -EV1
   EV3-14: paired t-test C43 = EV2
   parameters of no interest C44 = -EV2
    C45 = EV1-EV2
    C46 = EV2-EV1
STEP 6: C13 from each subject n.a. n.a.
Determining average z-scores (Separate for each paradigm and subject)    
  1. Independent components analysis (ICA), explanatory variable (EV), contrast (C)