EPHB2 germline variants in patients with colorectal cancer or hyperplastic polyposis
© Kokko et al; licensee BioMed Central Ltd. 2006
Received: 30 March 2006
Accepted: 01 June 2006
Published: 01 June 2006
Ephrin receptor B2 (EPHB2) has recently been proposed as a novel tumor suppressor gene in colorectal cancer (CRC). Inactivation of the gene has been shown to correlate with progression of colorectal tumorigenesis, and somatic mutations have been reported in both colorectal and prostate tumors.
Here we have analyzed the EPHB2 gene for germline alterations in 101 individuals either with 1) CRC and a personal or family history of prostate cancer (PC), or 2) intestinal hyperplastic polyposis (HPP), a condition associated with malignant degeneration such as serrated adenoma and CRC.
Four previously unknown missense alterations were observed, which may be associated with the disease phenotype. Two of the changes, I361V and R568W, were identified in Finnish CRC patients, but not in over 300 Finnish familial CRC or PC patients or more than 200 population-matched healthy controls. The third change, D861N, was observed in a UK HPP patient, but not in additional 40 UK HPP patients or in 200 UK healthy controls. The fourth change R80H, originally identified in a Finnish CRC patient, was also found in 1/106 familial CRC patients and in 9/281 healthy controls and is likely to be a neutral polymorphism.
We detected novel germline EPHB2 alterations in patients with colorectal tumors. The results suggest a limited role for these EPHB2 variants in colon tumor predisposition. Further studies including functional analyses are needed to confirm this.
The Wnt signaling pathway plays a central role in the development of colorectal cancer (CRC). In the majority of cases the early events in tumorigenesis involve inactivation of the tumor suppressor gene APC and stabilization of β-catenin [1, 2]. The constitutive activity of β-catenin/T cell factor-4 (Tcf-4) –complex leads to transcription of growth promoting genes, which together with subsequent inactivation of tumor suppressor genes drive the tumorigenesis further and enable the formation of abnormal growth patterns.
One of the direct transcriptional targets of β-catenin is Ephrin receptor B2 (EPHB2), whose protein product mediates the bi-directional migration and correct positioning of the cells along the crypt axis in the intestinal epithelium . The gene is located in chromosomal region 1p36, which is frequently altered in many types of cancer . Recent findings have demonstrated that EPHB2 appears to have a role in tumor progression, and acts as a tumor suppressor gene in colorectal cancer. In the study by Batlle et al. (2005) EPHB2 activity was observed to suppress CRC progression as the disruption of EphB2 in Apc min/+ mice was shown to accelerate tumor formation and growth in colon and rectum . In addition, premalignant lesions of the colon were shown to express high levels of EPHB2, whereas the expression was reduced in more advanced tumor stages . Somatic mutations in EPHB2 have been observed both in colorectal and prostate tumors, and an EPHB2 germline mutation has been associated with an increased prostate cancer (PC) risk [6–8]. Huusko et al. (2004) identified a nonsense mutation Q723X in a PC cell line, which led to the identification of other novel missense (R199H, A297S, D679N, T909M), nonsense (K1019X), frameshift and splice site mutations in prostate tumors obtained from patients in USA and Switzerland . In a later study by Kittles et al. (2005) the nonsense mutation K1019X was found to increase risk for PC over two-fold in an African American hereditary PC sample set . In 2005, Alazzouzi et al. observed frequent frameshift mutations on the A9 repeat of the EPHB2 gene in primary colorectal tumors in patients of mostly Caucasian origin (Finland, Germany, Spain and Japan) .
In our recent study we found decreased EPHB2 gene expression and protein levels in tumors with serrated CRC when compared to tumors from patients with conventional CRC . While no somatic EPHB2 mutations were observed in the serrated CRC tumors, one patient was found to harbor a germline EPHB2 alteration. This, together with the growing evidence of the role of EPHB2 in CRC tumorigenesis, prompted us to further investigate the role of EPHB2 in colorectal tumor predisposition. In this study, we have analyzed the EPHB2 gene for germline alterations in 101 patients with either 1) CRC and personal or family history of PC or 2) hyperplastic polyposis (HPP), a condition believed to be associated with serrated CRC .
Selection criteria of the 101 patients screened for germline EPHB2 mutations.
Number of patients
Country of origin
Patients with HPP*
Patients with CRC* and personal or family history of PC*
CRC in the patient and PC in the family
CRC and PC in the same patient
The frequencies of the observed EPHB2 variants were further analyzed in either Finnish familial prostate (n = 164, mean age of onset 63 years, range 40–86 years) and colorectal (n = 159, mean age of onset 65 years, range 27–90 years) cancer patients, or in additional UK HPP patients (n = 40, mean age of onset 54 years, range 23–74), respectively. The Finnish CRC patients belong to the aforementioned population based series of CRC patients [11, 12]. The familial PC cohort has also been previously well characterized and described [13, 14]. In addition, 282 samples from anonymous Finnish blood donors and 200 healthy UK individuals served as population-matched controls, respectively.
Patient information and samples were collected after obtaining informed consent. The study was approved by the ethics review committee of the Hospital District of Helsinki and Uusimaa (Dnr. 133/E8/03).
Mutation screening of the EPHB2 gene [GenBank: AF025304] in the 101 normal tissue samples was performed by direct sequencing (ABI PRISM 3100 Genetic Analyzer, Applied Biosystems, Foster City, CA). All coding exons with at least 70 nucleotides intronic sequence at the exon-intron boundaries, except exon 1, were sequenced. Primer sequences and PCR conditions are available upon request. Loss of heterozygosity (LOH) was analyzed by comparing sequences from the normal and the corresponding tumor DNA at the site of a variant. Frequencies of the observed alterations in familial CRC, PC and HPP patient samples, as well as in healthy population-matched controls, were determined by either direct sequencing or DHPLC (variant R568W). The DHPLC analysis was performed using the Agilent 1100 Services DHPLC Instrumentation (Agilent, Palo Alto, CA) with HPLC Column 50 × 3.0 mm × ¼" Helix DNA (Varian, Palo Alto, CA), Helix BufferPak DNA Analysis buffers "A" and "B" (Varian), and the following parameters: T = 64°C, flow 0.4 ml/min, gradient 3 min 58–66% B-buffer.
Observed EPHB2 germline variations in colorectal cancer and hyperplastic polyposis patients.
Index patient (diagnosis, age at diagnosis, nationality)
Family history of cancer
CRC, 73 years, FIN
brother, PC, 60 years father, GC*, 57 years
CRC, 75 years and PC, 73 years, FIN
serrated CRC, 69 years, FIN
father, PC, 82 years
HPP*, 58 years, UK
mother, CRC, 36 years
Ephrin receptors constitute a large family of receptor protein tyrosine kinases that together with ephrins, their membrane-bound receptor-like ligands, participate in developmental processes requiring organized patterning and movement of cells, such as axonal guidance, signal transduction, cell morphogenesis and angiogenesis [15, 16]. These proteins are widely expressed in adult tissues with organ specific patterns . In the intestine the most prominent ephrin receptor is EPHB2 . Recently, the loss of EPHB2 expression has been associated with colorectal carcinogenesis. The reduction of the EPHB2 levels has been found to correlate with the degree of malignancy, as a significant decrease in number of EPHB2 positive cells and in staining intensity has been observed at the adenoma-carcinoma transition [5, 18, 19]. In our recent study, we found even more profound reduction in EPHB2 levels in colorectal tumors with serrated histology when compared to conventional CRC . The link between reduced EPHB2 expression and poor survival has also been demonstrated . In mouse studies, reduced Ephb2 activity has been shown to accelerate tumorigenesis in the colon and rectum, and to result in the formation of aggressive adenocarcinomas in Apc Min/+ mice . Based on the growing evidence of the role of EPHB2 in CRC, we hypothesized that EPHB2 germline alterations may predispose to colorectal tumors.
We found a total of four previously unknown EPHB2 germline alterations, of which three may associate with the disease phenotype. The corresponding tumor DNA was available from two variant carriers, and one of the tumors displayed loss of the wild type allele. All three alterations are located in amino acids showing conservation across species from mouse, rat, chicken and cow down to fish, and were not observed in more than 200 healthy population-matched controls. However, the possibility that some or all of these variants are rare polymorphisms cannot be excluded, and further studies are needed to elucidate their functional significance.
In Finland, occurrence of recurrent founder mutations in several cancer susceptibility genes has been successfully utilized to evaluate the impact of these gene defects in extensive sets of patients and families [11, 12, 20]. Therefore, to further analyze the importance of the EPHB2 variants observed in the Finnish patients (I361V and R568W), their frequencies were analyzed among more than 300 Finnish familial CRC and PC patients. No additional carriers were observed. This suggests that the contribution of these rare germline alterations to familial CRC and PC burden in Finland is limited. The UK variant D861N was not observed in additional 40 HPP patients or in 200 healthy UK controls, suggesting as well a possible role for the variant in colorectal tumor susceptibility.
Overall, germline variants that may be associated with the disease phenotype were seen in 3/101 (3.0%) of patients analyzed for the EPHB2 gene. Our data are compatible with the results by Oba et al. (2001), who found no EPHB2 germline mutations among 50 CRC patients . Therefore, although some possibly disease associated germline EPHB2 variants do exist and may play a role in colorectal tumor predisposition, the observed EPHB2 inactivation in CRCs is largely due to other mechanisms, such as promoter hypermethylation that has frequently been observed in both MSI and MSS tumors, LOH, and somatic mutations in a coding region repeat sequence in MSI colorectal tumors [6, 18].
While EPHB2 is the prominent ephrin receptor in the intestine , also other members of the protein family may have a role in colorectal tumorigenesis. For example, a dramatic 94-fold decrease in EPHA6 expression has been observed in colorectal tumors when compared to normal tissue, and EPHA8 expression has been detected only in colon tumor but not in corresponding normal tissue . Furthermore, a pattern of inactivation similar to EPHB2 has been observed for EPHB4 and EPHB3 in colorectal tumors and/or cell lines, respectively . Also somatic mutations in the kinase domain of EPHA3 have been identified in colorectal tumors . Further studies are needed to more thoroughly elucidate the possible role of this large protein family in CRC tumorigenesis.
We report here the first EPHB2 germline alterations in patients with colorectal tumors. However, the rarity of such alterations in this and in a previous study , together with the sequential loss of EPHB2 expression during colorectal carcinogenesis, suggests a limited role for EPHB2 in CRC predisposition and speaks for the more pronounced role for EPHB2 in tumor progression than in tumor initiation. Notwithstanding, germline EPHB2 variants do exist and may be associated with colon tumor predisposition, but further studies including functional analyses are needed to confirm this.
ephrin receptor B2
denaturing high performance liquid chromatography
We would like to thank Sini Marttinen and Iina Vuoristo for assistance. The study was supported by grants from the European Commission (QLG2-CT-2001-01861), Finnish Cancer Society, the Academy of Finland (212901), Sigrid Juselius Foundation, Finnish Cultural Foundation, The Research and Science Foundation of Farmos and Foundation for Technological Advancement. This work was carried out at the Center of Excellence in Translational Genome-Scale Biology of the Academy of Finland. CE is a recipient of the Doris Duke Distinguished Clinical Scientist Award.
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